UTRdb

A curated database of 5' and 3' untranslated sequences of eukaryotic mRNAs

General Information
Organism Homo sapiens
Entry name 5UTR_107_ENST00000517291.2
Gene symbol MYC
Gene Id ENSG00000136997
Transcript ENST00000517291
Region 5' UTR
Genomic assembly 107
Gene exons 3
Transcript Length 1023

Genomic Information
Gene location 8:127735434-127742951:+
Total Gene length 7518
UTR genomic location join{8:127735519-127735836:+, 8:127736441-127736593:+}
UTR length 471

Features and Annotation

Ontologies		 -

miRNAs
Source Genomic position Accession_number Accession_Id Sequence
Tarbase8:127736437-127736464:+MIMAT0000759hsa-miR-148b-3pN/A
Tarbase8:127736438-127736463:+MIMAT0004958hsa-miR-301b-3pN/A
Tarbase8:127736439-127736464:+MIMAT0000243hsa-miR-148a-3pN/A
Tarbase8:127736439-127736463:+MIMAT0000425hsa-miR-130a-3pN/A
Tarbase8:127736439-127736463:+MIMAT0000688hsa-miR-301a-3pN/A
Tarbase8:127736439-127736463:+MIMAT0000691hsa-miR-130b-3pN/A
Tarbase8:127736441-127736464:+MIMAT0000231hsa-miR-199a-5pN/A
Tarbase8:127736441-127736464:+MIMAT0000263hsa-miR-199b-5pN/A

Orthologs		 -

PolyA Sites		 -

Conserved Blocks
Position Genomic position Description Graphical view UTR exon
123..1368:127735641-127735654:+phastConsElements100way Your browser does not support the HTML5 canvas tag. 8:127735519-127735836:+
149..1558:127735667-127735673:+phastConsElements100way Your browser does not support the HTML5 canvas tag. 8:127735519-127735836:+
170..1728:127735688-127735690:+phastConsElements100way Your browser does not support the HTML5 canvas tag. 8:127735519-127735836:+
200..2038:127735718-127735721:+phastConsElements100way Your browser does not support the HTML5 canvas tag. 8:127735519-127735836:+
312..3188:127735830-127735836:+phastConsElements100way Your browser does not support the HTML5 canvas tag. 8:127735519-127735836:+
14..328:127736454-127736472:+phastConsElements100way Your browser does not support the HTML5 canvas tag. 8:127736441-127736593:+
68..728:127736508-127736512:+phastConsElements100way Your browser does not support the HTML5 canvas tag. 8:127736441-127736593:+
125..1348:127736565-127736574:+phastConsElements100way Your browser does not support the HTML5 canvas tag. 8:127736441-127736593:+

Rfam motifs
Position Genomic position Motif_name Motif_description Motif_accession UTR exon
1..1058:127736441-127736545:+IRES_c-mycc-myc internal ribosome entry site (IRES)RF002168:127736441-127736593:+

Repeats		 -

uORFs
Position Genomic position Length First_ATG uORF_graphical_view uORF_utr_exon Mspec
3..2998:127735521-127735817:+297127735521 Your browser does not support the HTML5 canvas tag. 8:127735519-127735836:+

Variants		 -

Editing		 -

m6A
Position Genomic position RMVar_ID PMId Confidence UTR exon
30..308:127736470-127736470:+RMVar_ID_154728228002401miCLIP:(High)8:127736441-127736593:+
30..308:127736470-127736470:+RMVar_ID_154728928002401miCLIP:(High)8:127736441-127736593:+
30..308:127736470-127736470:+RMVar_ID_154729028002401miCLIP:(High)8:127736441-127736593:+

CAGE(s)		 -
IRES IRESite Id_35
Sequence 
         1 TTATGCCTCT ATCATTCCTC CCTATCTACA CTAACATCCC ACGCTCTGAA CGCGCGCCCA TTAATACCCT TCTTTCCTCC ACTCTCCCTG GGACTCTTGA
       101 TCAAAGCGCG GCCCTTTCCC CAGCCTTAGC GAGGCGCCCT GCAGCCTGGT ACGCGCGTGG CGTGGCGGTG GGCGCGCAGT GCGTTCTCGG TGTGGAGGGC
       201 AGCTGTTCCG CCTGCGATGA TTTATACTCA CAGGACAAGG ATGCGGTTTG TCAAACAGTA CTGCTACGGA GGAGCAGCAG AGAAAGGGAG AGGGTTTGAG
       301 AGGGAGCAAA AGAAAATGCA GCGGGCGGGC ACTTTGCACT GGAACTTACA ACACCCGAGC AAGGACGCGA CTCTCCCGAC GCGGGGAGGC TATTCTGCCC
       401 ATTTGGGGAC ACTTCCCCGC CGCTGCCAGG ACCCGCTTCT CTGAAAGGCT CTCCTTGCAG CTGCTTAGAC G